![]() may have some better ideas for you, he’s the chief installation expert I know and all around good guy. Python 2.7 is almost fully deprecated and so it will likely get harder to install and maintain. My guess would be qiime 1.9.1 is probably easiest to run out of a virtual machine because I dont think there’s much support anymore. thank you for being patient with us and I will work on being more patient in the future. ![]() It is absolutely a transition and a learning curve. Hi sorry if i made you feel unwelcome or uncomfortable. Maybe offering more workshops would help? I do those myself for genomic science, so I know they are a pain and loads of work. So, although I appreciate that we should “embrace” QIIME2, please also be understanding that those of us that are trying to do this on our own, figure out ways around a problem to make it work. I have been using QIIME since 2010, and I had to learn QIIME on my own - a supervisor gave me a set of scripts and said “follow that” and I had never worked in command line before in my life. ![]() Now there are “features” and ASVs to learn. You guys changed the language used! Not just the available tools. I think its important to recognize that many of us that use QIIME are not “scripters” and there is a learning curve with QIIME2. I know the scripts, so I need to manipulate a table, etc…, if I don’t know how to do it in QIIME2, I can do it QIIME1. I do want to stress though that being able to use QIIME 1, especially when you have not attended a QIIME 2 workshop, is very helpful. Until the next workshop.ĭo the QIIME developers/helpers (Justine and others): love you guys and I know you work incredibly hard to answer all of our questions. Right now, I have been running QIIME2 through a third party platform. Aloha, I started this post, and I actually gave up on using QIIME at all for awhile, and not sure where things stand with QIIME 1 on latest Catalina version (or QIIME2 for that matter).
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